SIGnature
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.. toctree::
    :maxdepth: 1
    :hidden:

    Overview <self>
    Installation <install>
    Tutorials <tutorials>
    API Reference <api>
    Release Notes <news>
    About <about>

Scoring the Importance of Genes using scRNA-seq Foundation Models
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**SIGnature** is a Python package that empowers researchers to rapidly query gene sets across diverse single-cell RNA sequencing (scRNA-seq) datasets through precomputed gene attribution scores.

Beyond querying capabilities, SIGnature also enables the generation of attribution scores on novel scRNA-seq data, allowing seamless integration with our collection of annotated studies.

.. image:: _static/overview_image.png
    :width: 75%
    :align: center

Capabilities
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Query Attributions
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^

:mod:`signature.signature` provides tools to query attributions across dozens of cell types from hundreds of studies.

.. image:: _static/query_image.png
    :width: 75%
    :align: center

Generate attributions
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^

:mod:`signature.signature` also provides tools to generate attribution scores on new data that can be integrated with our collection of annotated datasets.

.. image:: _static/generate_image.png
    :width: 75%
    :align: center

Indices
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| :ref:`genindex`
| :ref:`modindex`