Index A | C | E | F | L | M | N | O | P | Q | S | T | W A add_hits() (SIGnature.meta.Meta method) add_scores() (SIGnature.meta.Meta method) align_dataset() (in module SIGnature.utils) append() (SIGnature.meta.Meta method) C calculate_attributions() (SIGnature.models.scfoundation.SCFoundationWrapper method) (SIGnature.models.scimilarity.SCimilarityWrapper method) (SIGnature.models.ssl.SSLWrapper method) cat_by_min() (SIGnature.meta.Meta method) categorize_and_sort_by_score() (in module SIGnature.utils) check_genes() (SIGnature.SIGnature.SIGnature method) columns() (SIGnature.meta.Meta method) copy() (SIGnature.meta.Meta method) create_tiledb() (SIGnature.SIGnature.SIGnature method) E Encoder (class in SIGnature.models.scimilarity) F forward() (SIGnature.models.scimilarity.Encoder method) (SIGnature.models.scimilarity.SCimilarityWrapper method) L load_state() (SIGnature.models.scimilarity.Encoder method) lognorm_counts() (in module SIGnature.utils) M Meta (class in SIGnature.meta) module SIGnature.meta SIGnature.models.scfoundation SIGnature.models.scimilarity SIGnature.models.ssl SIGnature.SIGnature SIGnature.utils N ncell() (SIGnature.meta.Meta method) normalize_attribution_matrix() (in module SIGnature.utils) O optimize_tiledb_array() (in module SIGnature.utils) P preprocess_adata() (SIGnature.models.scfoundation.SCFoundationWrapper method) (SIGnature.models.scimilarity.SCimilarityWrapper method) Q query_attributions() (SIGnature.SIGnature.SIGnature method) S samphit_boxplot() (SIGnature.meta.Meta method) samphit_df() (SIGnature.meta.Meta method) save_state() (SIGnature.models.scimilarity.Encoder method) SCFoundationWrapper (class in SIGnature.models.scfoundation) SCimilarityWrapper (class in SIGnature.models.scimilarity) SIGnature (class in SIGnature.SIGnature) SIGnature.meta module SIGnature.models.scfoundation module SIGnature.models.scimilarity module SIGnature.models.ssl module SIGnature.SIGnature module SIGnature.utils module SSLWrapper (class in SIGnature.models.ssl) subset_by_frequency() (in module SIGnature.utils) subset_by_unique_values() (in module SIGnature.utils) subset_hq() (SIGnature.meta.Meta method) subset_invivo() (SIGnature.meta.Meta method) T title_name() (in module SIGnature.utils) top_cells() (SIGnature.meta.Meta method) W write_csr_to_tiledb() (in module SIGnature.utils)