Generate Data for a BaselineObject
Source: R/simulate_data_baseline.R
generate-BaselineObject-method.Rd
Generate Data for a BaselineObject
Usage
# S4 method for class 'BaselineObject'
generate(x, ...)
Arguments
- x
a
BaselineObject
object created by create_baseline_object- ...
additional parameters are ignored
Value
A BaselineDataFrame object
Examples
bl_biomarkers <- create_baseline_object(
n_trt_int = 100,
n_ctrl_int = 50,
n_ctrl_ext = 100,
covariates = baseline_covariates(
c("b1", "b2", "b3"),
means_int = c(0, 0, 0),
covariance_int = covariance_matrix(c(1, 1, 1), c(.8, .3, .8))
),
transformations = list(
exp_b1 = function(data) exp(data$b1),
b2 = binary_cutoff("b2", int_cutoff = 0.7, ext_cutoff = 0.5)
)
)
generate(bl_biomarkers)
#> Baseline Data List
#>
#> Internal Treated
#> patid ext trt b1 b2 b3 exp_b1
#> 1 0 1 1.9868469 1 -0.9774339 7.2925034
#> 2 0 1 -0.5626329 0 -0.8197433 0.5697071
#> 3 0 1 1.7877273 1 0.4926398 5.9758555
#> 4 0 1 0.3868788 0 -0.6389805 1.4723780
#> 5 0 1 -0.1674349 1 1.2243768 0.8458316
#> 6 0 1 -0.2388432 0 0.1933471 0.7875384
#> Internal Control
#> patid ext trt b1 b2 b3 exp_b1
#> 101 0 0 0.91163631 0 -1.23328855 2.4883910
#> 102 0 0 -0.05962584 0 0.01036414 0.9421170
#> 103 0 0 -1.74516314 0 -1.87673235 0.1746165
#> 104 0 0 -0.71453896 0 -0.89547245 0.4894177
#> 105 0 0 1.14064393 0 -1.26310156 3.1287824
#> 106 0 0 1.25791955 1 1.04905530 3.5180947
#> External Control
#> patid ext trt b1 b2 b3 exp_b1
#> 151 1 0 -0.60944092 0 -0.19344395 0.5436547
#> 152 1 0 -0.81619792 0 -0.19270257 0.4421094
#> 153 1 0 -1.69887264 0 -0.12565894 0.1828896
#> 154 1 0 0.92772925 1 0.50089527 2.5287605
#> 155 1 0 -0.11833091 0 -0.01742130 0.8884020
#> 156 1 0 -0.01166284 0 0.08529111 0.9884049